| Arslan H, Davuluri A, Nguyen HH, So BR, Lee J, Jeon J, Yum K. 3D Bioprinting Using Universal Fugitive Network Bioinks. ACS Applied Bio Materials. 2024 Sep 18. |
| Dominguez C, Teranikar T, Lee J. Novel Image Processing to Restore Scattered Light-sheet Microscopic Imaging Technique and its Application for Quantifying Biomechanics. InCutting-edge Technologies in Biological Sensing and Analysis 2024 Feb 6 (pp. 271-284). River Publishers. |
| Soto-Garcia LF, Guerrero-Rodriguez ID, Hoang L, Laboy-Segarra SL, Phan NTK, Villafuerte E, Lee J, Nguyen KT. Photocatalytic and Photothermal Antimicrobial Mussel-Inspired Nanocomposites for Biomedical Applications. Int J Mol Sci. 2023 Aug 26;24(17):13272. doi: 10.3390/ijms241713272. PMID: 37686076; PMCID: PMC10488035. |
| Seo J, Lee J, Lee J, Ko H. Deep compression network for enhancing numerical reconstruction quality of full-complex holograms. Optics Express. 2023 Jul 17;31(15):24573-97. |
| Teranikar T, Dominguez CM, Lee J, Biomechanical effects in cardiac development in zebrafish model, Current Opinion in Biomedical Engineering 2023 Apr 5:100459. |
| Salehin N, Teranikar T, Lee J, Chuong CJ, Ventricular anisotropic deformation and contractile function of the developing heart of zebrafish in vivo, developmental dynamics, 2023 Feb;252(2):247-62. |
| Zhang X, Almasian M, Hassan SS, Jotheesh R, Kadam VA, Polk AR, Saberigarakani A, Rahat A, Yuan J, Lee J, Carroll K, Ding Y. 4D Light-sheet imaging and interactive analysis of cardiac contractility in zebrafish larvae. APL Bioeng. 2023 Jun 15;7(2):026112. doi: 10.1063/5.0153214. PMID: 37351330; PMCID: PMC10283270. |
| Teranikar T, Villarreal C, Salehin N, Ijaseun T, Lim J, Dominguez C, Nguyen V, Cao H, Chuong CJ, Lee J. Scale space detector for analyzing spatiotemporal ventricular contractility and nuclear morphogenesis in zebrafish. iScience. 2022 Aug 5:104876 |
| Messerschmidt V, Chintapula U, Bonatesta F, Nadri A, Laboy-Segarra SL, Nguyen KT, Cao H, Mager E, Lee J, In vivo evaluation of non-viral NICD plasmid-loaded PLGA nanoparticles in developing zebrafish to improve cardiac functions, Frontiers in Physiology, 2022 Feb 23;13:819767. |
| Le T, Zhang J, Nguyen AH, Torres RST, Vo K, Dutt N, Lee J, Ding Y, Xu X, Lau MP. A novel wireless ecg system for prolonged monitoring of multiple zebrafish for heart disease and drug screening studies. Biosensors and Bioelectronics. 2021:113808 |
| Teranikar TA, Lim J, Ijaseun T, Lee J, Development of Planar Illumination Strategies for Solving Mysteries in the Sub-Cellular Realm, International Journal of Molecular Sciences. 2022 Jan 31;23(3):1643 |
| Pas KE, Laboy-Segarra S, Lee J, System of pattern formation within developmental biology, Progress in Biophysics and Molecular Biology. 2021 Oct 5 |
| Messerschmidt V, Kuriakose AE, Chintapula U, Nguyen KT, Lee J, Notch Intracellular Domain Plasmid Delivery via Poly(lactic-co-glycolic acid) Nanoparticles to upregulate Notch Pathway Molecules. Front. Cardiovasc. Med. doi: 10.3389/fcvm.2021.707897. 2021 Aug 20 |
| Naderi AM, Bu H, Su J, Huang MH, Vo K, Torres RS, Chiao JC, Lee J, Lau MP, Xu X, Cao H. Deep learning-based framework for cardiac function assessment in embryonic zebrafish from heart beating videos. Computers in Biology and Medicine. 2021 Jun 11:104565. |
| Zhang B, Pas K, Ijaseun T, Cao H, Fei P, Lee J. Automatic segmentation and cardiac mechanics analysis of evolving zebrafish using deep-learning. Front. Cardiovasc. Med. 8:675291. 2021 Jun 9 |
| Salehin N, Villarreal C, Teranikar T, Dubansky B, Lee J, Chuong CJ. Assessing Pressure–Volume Relationship in Developing Heart of Zebrafish In-Vivo. Annals of Biomedical Engineering. 2021 Feb 2:1-4. |
| Teranikar T, Messerschmidt V, Lim J, Bailey Z, Chiao JC, Cao H, Liu J, Lee J. Correcting anisotropic intensity in light sheet images using dehazing and image morphology. APL bioengineering. 2020 Sep 1;4(3):036103. |
| Hsu JJ, Vedula V, Baek KI, Chen C, Chen J, Chou MI, Lam J, Subhedar S, Wang J, Ding Y, Chang CC, Lee J, Demer LL, Tintut Y, Marsden AL, Hsiai TK. Contractile and hemodynamic forces coordinate Notch1b-mediated outflow tract valve formation. JCI insight. 2019 Apr 11. |
| Fei P*, Jun Nie*, Lee J*, Ding Y, Li S, Yu Z, Zhang H, Hagiwara M, Yu T, Segura T, Ho CM, Zhu D, Hsiai TK, Sub-voxel light-sheet microscopy for high-resolution, high-throughput volumetric imaging of large biomedical specimens. Advanced Photonics. 2019 Jan;1(1):016002. *Co-first Authors (Journal Cover Page), Highlighted by Nature Photonics |
| Messerschmidt V, Bailey Z, Baek KI, Bryant R, Li R, Hsiai TK, Lee J, Light-sheet Fluorescence Microscopy to Capture 4-Dimensional Images of the Effects of Modulating Shear Stress on the Developing Zebrafish Heart, Journal of visualized experiments: JoVE 2018 Aug 10(138):e57763. |
| Ding Y, Bailey Z, Messerschmidt V, Nie J, Bryant R, Rugonyi S, Fei P, Lee J, Hsiai TK. Light-sheet Fluorescence Microscopy for the Study of the Murine Heart. Journal of visualized experiments: JoVE. 2018 (139), Sep 15(139):e57769 |
| Lee J, Vedula V, Baek KI, Chen J, Hsu JJ, Ding Y, Chang CC, Kang H, Small A, Fei P, Chuong CM. Spatial and temporal variations in hemodynamic forces initiate cardiac trabeculation. JCI insight. 2018 Jul 12;3(13). |
| Ding Y, Lee J, Hsu JJ, Chang CC, Baek KI, Ranjbarvaziri S, Ardehali R, Packard RR, Hsiai TK. Light-Sheet Imaging to Elucidate Cardiovascular Injury and Repair. Current cardiology reports. 2018 May 1;20(5):35. |
| Ding Y, Yu J, Abiri A, Abiri P, Lee J, Chang CC, Baek KI, Packard RR, Hsiai TK. Integrating 4-d light-sheet imaging with interactive virtual reality to recapitulate developmental cardiac mechanics and physiology. In Advanced Biomedical and Clinical Diagnostic and Surgical Guidance Systems XVI 2018 Feb 12 (Vol. 10484, p. 104841C). International Society for Optics and Photonics. (Conference Proceeding) |
| Ding Y, Abiri A, Abiri P, Li S, Chang CC, Baek KI, Hsu JJ, Sideris E, Li Y, Lee J, Segura T. Integrating light-sheet imaging with virtual reality to recapitulate developmental cardiac mechanics. JCI insight. 2017 Nov 16;2(22). |
| Vedula V, Lee J, Xu H, Kuo CCJ, Hsiai TK, and Marsden, AL, A method to quantify mechanobiologic forces during zebrafish cardiac development using 4-D light sheet imaging and computational modeling. PLoS Comput Biol 2017, Oct 30; 13(10): e1005828 |
| Lee J, Chou TC, Kang D, Chen J, Wang W, Di Carlo D, Tai YC, Hsiai TK, A Rapid Capillary-Pressure Driven Micro-Channel to Demonstrate Newtonian Fluid Behavior of Zebrafish Blood at High Shear Rates, Scientific Reports. 2017;7. |
| Ding Y*, Lee J*, Ma J, Sung K, Yokota T, Singh N, Nakano A, Wang Y, Nguyen TP, Kulkarni R, Fei P, Hsiai TK, Light-sheet fluorescent imaging to localize cardiac lineage and protein distribution, Scientific Reports. 2017;7. *Co-first Authors |
| Lee J, Fei P, Jen N, Kang H, Packard RRS, Ho CH, Li R, Hsiai TK. Light-Sheet Microscopy to Elucidate Hemodynamic Forces and Modulation of Cardiac Trabeculation: Implications for Embryonic Contractile Function. Journal of Clinical Investigation. 2016 Mar 28;126 (5) |
| Fei P*, Lee J*, Packard RR, Sereti KI, Xu H, Ma J, Ding Y, Kang H, Chen H, Sung K, Kulkarni R, Ardehali R, Kuo CCJ Ho CM, Hsiai TK. Cardiac Light-Sheet Fluorescent Microscopy for Multi-Scale and Rapid Imaging of Architecture and Function. Scientific Reports. 2016;6. *Co-first Authors |
| Guan Z*, Lee J*, Jiang H, Dong S, Jen N, Hsiai T, Ho CM, Fei P. Compact plane illumination plugin device to enable light sheet fluorescence imaging of multi-cellular organisms on an inverted wide-field microscope. Biomedical Optics Express. 2016 Jan 1;7(1):194-208. *Co-first Authors |
| Lee J, Packard RR, Hsiai TK. Blood flow modulation of vascular dynamics. Current opinion in lipidology. 2015 Oct 1;26(5):376-83. |
| Li R, Jen N, Wu L, Lee J, Fang K, Quigley K, Lee K, Wang S, Zhou B, Vergnes L, Chen YR, Hsiai TK. Disturbed Flow Induces Autophagy But Impairs Autophagic Flux to Perturb Mitochondrial Homeostasis. Antioxidants and Redox Signaling. 2015 May 28(ja). (Journal Cover Page) |
| Li R, Beebe T, Jen N, Yu F, Takabe W, Harrison M, Cao H, Lee J, Yang H, Han P, Wang K, Shimizu H, Chen J, Lien CL, Chi NC, Hsiai TK. Shear Stress–Activated Wnt-Angiopoietin-2 Signaling Recapitulates Vascular Repair in Zebrafish Embryos. Arteriosclerosis, thrombosis, and vascular biology. 2014 Oct 1;34(10):2268-75. |
| Lee J, Cao H, Kang BJ, Jen N, Yu F, Lee CA, Fei P, Park J, Bohlool S, Lash-Rosenberg L, Shung KK, Hsiai TK. Hemodynamics and Ventricular Function in a Zebrafish Model of Injury and Repair. Zebrafish. 2014 Oct 1;11(5):447-54. |
| Cao H, Yu F, Zhao Y, Zhang X, Tai J, Lee J, Darehzereshki A, Bersohn M, Lien CL, Chi NC, Tai YC, Hsiai TK. Wearable multi-channel microelectrode membranes for elucidating electrophysiological phenotypes of injured myocardium. Integrative Biology. 2014;6(8):789-95. |
| Cao H, Yu F, Zhao Y, Scianmarello N, Lee J, Dai W, Jen N, Beebe T, Li R, Ebrahimi R, Chang DS, Mody FV, Pacella J, Tai TC, Hsiai T. Stretchable electrochemical impedance sensors for intravascular detection of lipid-rich lesions in New Zealand White rabbits. Biosensors and Bioelectronics. 2014 Apr 15;54:610-6. |
| Lee J, Moghadam ME, Kung E, Cao H, Beebe T, Miller Y, Roman BL, Lien CL, Chi NC, Marsden AL, Hsiai TK. Moving domain computational fluid dynamics to interface with an embryonic model of cardiac morphogenesis. PloS one. 2013 Aug 1;8(8):e72924. |
| Yu F, Lee J, Jen N, Li X, Zhang Q, Tang R, Zhou Q, Kim ES, Hsiai TK. Elevated electrochemical impedance in the endoluminal regions with high shear stress: Implication for assessing lipid-rich atherosclerotic lesions. Biosensors and Bioelectronics. 2013 May 15;43:237-44. |
| Jen N, Yu F, Lee J, Wasmund S, Dai X, Chen C, Chawareeyawong P, Yang Y, Li R, Hamdan MH, Hsiai TK. Atrial fibrillation pacing decreases intravascular shear stress in a New Zealand white rabbit model: implications in endothelial function. Biomechanics and modeling in mechanobiology. 2013 Aug 1;12(4):735-45. |
| Li R, Mittelstein D, Lee J, Fang K, Majumdar R, Tintut Y, Demer LL, Hsiai TK. A dynamic model of calcific nodule destabilization in response to monocyte-and oxidized lipid-induced matrix metalloproteinases. American Journal of Physiology-Cell Physiology. 2012 Feb 15;302(4):C658-65. |